CDC Science Clips: Volume 8, Issue 47, November 22, 2016

Each Tuesday, to enhance awareness of emerging scientific knowledge, selected science clips will be posted here for the public health community. The focus is applied public health research and prevention science that has the capacity to improve health now.

1. Top Articles of the Week
   Selected weekly by a senior CDC scientist from the standard sections listed below.
   The names of CDC authors are indicated in bold text.
   • Chronic Diseases and Conditions
     • Risk indicators for periodontitis in US adults: NHANES 2009 to 2012
       Eke PI, Wei L, Thornton-Evans GO, Borrell LN, Borgnakke WS, Dye B, Genco RJ.
       J Periodontol. 2016 Oct;87(10):1174-85.
       
   • Communicable Diseases
     • Ebola: anatomy of an epidemic
       Lo TQ, Marston BJ, Dahl BA, De Cock KM.
       Annu Rev Med. 2016 Oct 21.
       
   • Food Safety
     • Foodborne disease outbreaks associated with organic foods in the United States
       Harvey RR, Zakhour CM, Gould LH.
       J Food Prot. 2016 ;79(11):1953-1958.
       
   • Genetics and Genomics
     • Understanding pneumococcal serotype 1 biology through population genomic analysis
       Chaguza C, Cornick JE, Harris SR, Andam CP, Bricio-Moreno L, Yang M, Yalcin F, Ousmane S, Govindpersad S, Senghore M, Ebruke C, Du Plessis M, Kiran AM, Pluschke G, Sigauque B, McGee L, et al .
       BMC Infect Dis. 2016 Nov 8;16(1):649.
       
   • Immunity and Immunization
     • Using the 4 pillars practice transformation program to increase adult influenza vaccination and reduce missed opportunities in a randomized cluster trial
       Lin CJ, Nowalk MP, Pavlik VN, Brown AE, Zhang S, Raviotta JM, Moehling KK, Hawk M, Ricci EM, Middleton DB, Patel S, South-Paul JE, Zimmerman RK.
       BMC Infect Dis. 2016 Nov 3;16(1):623.
       
     • Uptake of rotavirus vaccine among US infants at Immunization Information System Sentinel Sites
       Pringle K, Cardemil CV, Pabst LJ, Parashar UD, Cortese MM.
       Vaccine. 2016 Oct 31.
       
   • Injury and Violence
     • Intimate partner violence and adherence to HIV pre-exposure prophylaxis (PrEP) in African women in HIV serodiscordant relationships: A prospective cohort study
       Roberts ST, Haberer J, Celum C, Mugo N, Ware NC, Cohen CR, Tappero JW, Kiarie J, Ronald A, Mujugira A, Tumwesigye E, Were E, Irungu E, Baeten JM.
       J Acquir Immune Defic Syndr. 2016 Nov 1;73(3):313-322.
       
   • Laboratory Sciences
     • Establishment of an algorithm using prM/E- and NS1-specific IgM antibody-capture enzyme-linked immunosorbent assays in diagnosis of Japanese encephalitis virus and West Nile virus infections in humans
       Galula JU, Chang GJ, Chuang ST, Chao DY.
       J Clin Microbiol. 2016 Feb;54(2):412-22.
       
   • Occupational Safety and Health - Mining
     • Development of noise controls for longwall shearer cutting drums
       Camargo HE, Azman AS, Alcorn L.
       Noise Control Eng J. 2016 ;64(5):573-585.
       
   • Zoonotic and Vectorborne Diseases
     • Estimating the burden of Chagas disease in the United States
       Manne-Goehler J, Umeh CA, Montgomery SP, Wirtz VJ.
       PLoS Negl Trop Dis. 2016 Nov;10(11):e0005033.
       
     • Characterizing the pattern of anomalies in congenital Zika syndrome for pediatric clinicians
       Moore CA, Staples JE, Dobyns WB, Pessoa A, Ventura CV, Fonseca EB, Ribeiro EM, Ventura LO, Neto NN, Arena JF, Rasmussen SA.
       JAMA Pediatr. 2016 Nov 3.
       
   
   
2. CDC Authored Publications
   The names of CDC authors are indicated in bold text.
   Articles published in the past 6-8 weeks authored by CDC or ATSDR staff.
   • Chronic Diseases and Conditions
     2. Epidemiological differences between localised and non-localised low back pain
        Coggon D, Ntani G, Walker-Bone K, Palmer KT, Felli VE, Harari R, Barrero LH, Felknor SA, et al .
        Spine (Phila Pa 1976). 2016 Nov 4.
        
     3. Understanding barriers to cervical cancer screening in women with access to care, Behavioral Risk Factor Surveillance System, 2014
        Crawford A, Benard V, King J, Thomas CC.
        Prev Chronic Dis. 2016 Nov 10;13:E154.
        
     4. Epilepsy among Iraq and Afghanistan war veterans - United States, 2002-2015
        Pugh MJ, Van Cott AC, Amuan M, Baca C, Rutecki P, Zack MM, Kobau R.
        MMWR Morb Mortal Wkly Rep. 2016 Nov 11;65(44):1224-1227.
        
   • Communicable Diseases
     5. Association between enacted stigma and HIV-related risk behavior among MSM, National HIV Behavioral Surveillance System, 2011
        Balaji AB, Bowles KE, Hess KL, Smith JC, Paz-Bailey G.
        AIDS Behav. 2016 Nov 9.
        
     6. Estimating HIV incidence using a cross-sectional survey: comparison of three approaches in a hyperendemic setting, Ndhiwa sub-county, Kenya, 2012
        Blaizot S, Kim AA, Zeh C, Riche B, Maman D, DeCock K, Etard JF, Ecochard R.
        AIDS Res Hum Retroviruses. 2016 Nov 8.
        
     7. Outcomes of Nigeria's HIV/AIDS treatment program for patients initiated on antiretroviral treatment between 2004-2012
        Dalhatu I, Onotu D, Odafe S, Abiri O, Debem H, Agolory S, Shiraishi RW, Auld AF, Swaminathan M, Dokubo K, Ngige E, Asadu C, Abatta E, Ellerbrock TV.
        PLoS One. 2016 ;11(11):e0165528.
        
     8. Characterization of resistance genes and plasmids from outbreaks and illness clusters caused by Salmonella resistant to ceftriaxone in the United States, 2011-2012
        Folster JP, Grass JE, Bicknese A, Taylor J, Friedman CR, Whichard JM.
        Microb Drug Resist. 2016 Nov 9.
        
     9. Pneumococcal serotype 5 colonization prevalence among newly arrived unaccompanied children one year after an outbreak-Texas, 2015
        Kobayashi M, Misegades L, Fleming-Dutra KE, Ahmed S, Gierke R, Nanduri S, Healy JM, Nguyen D, Carvalho MD, Pimenta F, Waterman SH, Moore MR, Kim C, Whitney CG.
        Pediatr Infect Dis J. 2016 Nov 8.
        
     10. Progress toward poliomyelitis eradication - Afghanistan, January 2015-August 2016
         Mbaeyi C, Shukla H, Smith P, Tangermann RH, Martinez M, Jorba JC, Hadler S, Ehrhardt D.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 04;65(43):1195-1199.
         
     11. The impact of prescriptions on sex partner treatment using expedited partner therapy for Chlamydia trachomatis infection, New York City, 2014-2015
         Oliver A, Rogers M, Schillinger JA.
         Sex Transm Dis. 2016 01 Nov;43(11):673-678.
         
     12. Ocular syphilis - eight jurisdictions, United States, 2014-2015
         Oliver SE, Aubin M, Atwell L, Matthias J, Cope A, Mobley V, Goode A, Minnerly S, Stoltey J, Bauer HM, Hennessy RR, DiOrio D, Fanfair RN, Peterman TA, Markowitz L.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 04;65(43):1185-1188.
         
     13. Gonorrhea control, United States, 1972-2015, a narrative review
         Peterman TA, O'Connor K, Bradley HM, Torrone EA, Bernstein KT.
         Sex Transm Dis. 2016 Dec;43(12):725-730.
         
     14. Investigation of the first seven reported cases of Candida auris, a globally emerging invasive, multidrug-resistant fungus - United States, May 2013-August 2016
         Vallabhaneni S, Kallen A, Tsay S, Chow N, Welsh R, Kerins J, Kemble SK, Pacilli M, Black SR, Landon E, Ridgway J, Palmore TN, Zelzany A, Adams EH, Quinn M, Chaturvedi S, Greenko J, Fernandez R, Southwick K, Furuya EY, Calfee DP, Hamula C, Patel G, Barrett P, Lafaro P, Berkow EL, Moulton-Meissner H, Noble-Wang J, Fagan RP, Jackson BR, Lockhart SR, Litvintseva AP, Chiller TM.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 11;65(44):1234-1237.
         
   • Drug Safety
     15. Core elements of outpatient antibiotic stewardship
         Sanchez GV, Fleming-Dutra KE, Roberts RM, Hicks LA.
         MMWR Recomm Rep. 2016 Nov 11;65(6):1-12.
         
   • Genetics and Genomics
     16. Comparison of DNA testing strategies in monitoring human papillomavirus infection prevalence through simulation
         Lin CY, Li L.
         BMC Infect Dis. 2016 Nov 7;16(1):642.
         
     17. Use of DNA barcoding to distinguish the malaria vector Anopheles neivai in Colombia
         Lopez-Rubio A, Suaza-Vasco J, Marcet PL, Ruiz-Molina N, Caceres L, Porter C, Uribe S.
         Zootaxa. 2016 Oct 17;4175(4):377-389.
         
     18. Next generation sequencing in clinical and public health microbiology
         MacCannell D.
         Clin Microbiol Newsl. 2016 01 Nov;38(21):169-176.
         
     19. Complete, closed genome sequences of 10 Salmonella enterica subsp. enterica serovar Typhimurium strains isolated from human and bovine sources
         Nguyen SV, Harhay DM, Bono JL, Smith TP, Fields PI, Dinsmore BA, Santovenia M, Kelley CM, Wang R, Bosilevac JM, Harhay GP.
         Genome Announc. 2016 Nov 3;4(6).
         
     20. Novel viruses isolated from mosquitoes in Pantanal, Brazil
         Pauvolid-Correa A, Solberg O, Couto-Lima D, Nogueira RM, Langevin S, Komar N.
         Genome Announc. 2016 Nov 3;4(6).
         
     21. The effect of phylogenetic signal reduction on genotyping of hepatitis E viruses of the species Orthohepevirus A
         Purdy MA, Sue A.
         Arch Virol. 2016 Nov 5.
         
   • Healthcare Associated Infections
     22. Hepatitis C virus transmission in a skilled nursing facility, North Dakota, 2013
         Calles DL, Collier MG, Khudyakov Y, Mixson-Hayden T, VanderBusch L, Weninger S, Miller TK.
         Am J Infect Control. 2016 Nov 2.
         
   • Immunity and Immunization
     23. Monovalent rotavirus vaccine effectiveness and impact on rotavirus hospitalizations in Zanzibar, Tanzania: data from the first 3 years post-introduction
         Abeid KA, Jani B, Cortese MM, Kamugisha C, Mwenda JM, Pandu AS, Msaada KA, Mohamed AS, Khamis AU, Parashar UD, Saleh AA.
         J Infect Dis. 2016 Nov 3.
         
     24. Comparative studies of infectivity, immunogenicity and cross-protective efficacy of live attenuated influenza vaccines containing nucleoprotein from cold-adapted or wild-type influenza virus in a mouse model
         Isakova-Sivak I, Korenkov D, Smolonogina T, Tretiak T, Donina S, Rekstin A, Naykhin A, Shcherbik S, Pearce N, Chen LM, Bousse T, Rudenko L.
         Virology. 2016 Nov 6;500:209-217.
         
     25. Nationwide trends in bacterial meningitis before the introduction of 13-valent pneumococcal conjugate vaccine-Burkina Faso, 2011-2013
         Kambire D, Soeters HM, Ouedraogo-Traore R, Medah I, Sangare L, Yameogo I, Sawadogo G, Ouedraogo AS, Hema-Ouangraoua S, McGee L, Srinivasan V, Ake F, Congo-Ouedraogo M, Sanou S, Ba AK, Novak RT, Van Beneden C.
         PLoS One. 2016 ;11(11):e0166384.
         
     26. Recommendations for use of meningococcal conjugate vaccines in HIV-infected persons - Advisory Committee on Immunization Practices, 2016
         MacNeil JR, Rubin LG, Patton M, Ortega-Sanchez IR, Martin SW.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 04;65(43):1189-1194.
         
     27. Progress toward regional measles elimination - worldwide, 2000-2015
         Patel MK, Gacic-Dobo M, Strebel PM, Dabbagh A, Mulders MN, Okwo-Bele JM, Dumolard L, Rota PA, Kretsinger K, Goodson JL.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 11;65(44):1228-1233.
         
     28. Targeting pediatric versus elderly populations for norovirus vaccines: A model-based analysis of mass vaccination options
         Steele MK, Remais JV, Gambhir M, Glasser JW, Handel A, Parashar UD, Lopman BA.
         Epidemics. 2016 Oct 24;17:42-49.
         
   • Informatics
     29. eSIP-Saude: Mozambique's novel approach for a sustainable human resources for health information system
         Waters KP, Mazivila ME, Dgedge M, Necochea E, Manharlal D, Zuber A, de Faria Leao B, Bossemeyer D, Vergara AE.
         Hum Resour Health. 2016 Nov 5;14(1):66.
         
   • Injury and Violence
     30. Adverse weather conditions and fatal motor vehicle crashes in the United States, 1994-2012
         Saha S, Schramm P, Nolan A, Hess J.
         Environ Health. 2016 Nov 8;15(1):104.
         
     31. Seeing students squirm: Student nurses' bullying experiences in clinical settings
         Smith CR, Gillespie GL, Brown KC, Grubb PL.
         West J Nurs Res. 2016 Oct;38(10):1397-8.
         
     32. In search of modifiable risk and protective factors for teen dating violence
         Smith-Darden JP, Kernsmith PD, Reidy DE, Cortina KS.
         J Res Adolesc. 2016 .
         
   • Laboratory Sciences
     33. Myofibroblasts and lung fibrosis induced by carbon nanotube exposure
         Dong J, Ma Q.
         Part Fibre Toxicol. 2016 Nov 4;13(1):60.
         
     34. Letter to the Editor: Preparation of respirable crystalline silica samples for subsequent analysis
         Harper M, Key-Schwartz RJ.
         Regul Toxicol Pharmacol. 2016 Nov 5.
         
     35. Evaluation of the Illumigene Malaria LAMP: a robust molecular diagnostic tool for malaria parasites
         Lucchi NW, Gaye M, Diallo MA, Goldman IF, Ljolje D, Deme AB, Badiane A, Ndiaye YD, Barnwell JW, Udhayakumar V, Ndiaye D.
         Sci Rep. 2016 Nov 09;6:36808.
         
     36. Validation of high throughput screening of human sera for detection of anti-PA IgG by Enzyme-Linked Immunosorbent Assay (ELISA) as an emergency response to an anthrax incident
         Semenova VA, Steward-Clark E, Maniatis P, Epperson M, Sabnis A, Schiffer J.
         Biologicals. 2016 Nov 1.
         
     37. Skin vaccination against rotavirus using microneedles: Proof of concept in gnotobiotic piglets
         Wang Y, Vlasova A, Velasquez DE, Saif LJ, Kandasamy S, Kochba E, Levin Y, Jiang B.
         PLoS One. 2016 ;11(11):e0166038.
         
   • Maternal and Child Health
     38. Elimination of mother-to-child transmission of HIV and syphilis in Cuba and Thailand
         Ishikawa N, Newman L, Taylor M, Essajee S, Pendse R, Ghidinelli M.
         Bull World Health Organ. 2016 Nov 1;94(11):787-787a.
         
     39. Complications of haemophilia in babies (first two years of life): a report from the Centers for Disease Control and Prevention Universal Data Collection System
         Kulkarni R, Presley RJ, Lusher JM, Shapiro AD, Gill JC, Manco-Johnson M, Koerper MA, Abshire TC, DiMichele D, Hoots WK, Mathew P, Nugent DJ, Geraghty S, Evatt BL, Soucie JM.
         Haemophilia. 2016 Nov 4.
         
     40. Factors associated with self-injurious behaviors in children with autism spectrum disorder: Findings from two large national samples
         Soke GN, Rosenberg SA, Hamman RF, Fingerlin T, Rosenberg CR, Carpenter L, Lee LC, Giarelli E, Wiggins LD, Durkin MS, Reynolds A, DiGuiseppi C.
         J Autism Dev Disord. 2016 Nov 9.
         
   • Occupational Safety and Health
     41. Shift work, job strain and changes in the body mass index among women: a prospective study
         Fujishiro K, Lividoti Hibert E, Schernhammer E, Rich-Edwards JW.
         Occup Environ Med. 2016 Nov 4.
         
     42. Development of a source-exposure matrix for occupational exposure assessment of electromagnetic fields in the INTEROCC study
         Vila J, Bowman JD, Figuerola J, Morina D, Kincl L, Richardson L, Cardis E.
         J Expo Sci Environ Epidemiol. 2016 Nov 09.
         
     43. The impact of perceived intensity and frequency of police work occupational stressors on the cortisol awakening response (CAR): Findings from the BCOPS study
         Violanti JM, Fekedulegn D, Andrew ME, Hartley TA, Charles LE, Miller DB, Burchfiel CM.
         Psychoneuroendocrinology. 2016 Oct 21;75:124-131.
         
   • Physical Activity
     44. Associations between physical activity and cognitive functioning among middle-aged and older adults
         Miyawaki CE, Bouldin ED, Kumar GS, McGuire LC.
         J Nutr Health Aging. 2016 02 Nov:1-11.
         
   • Reproductive Health
     45. Combined hormonal contraceptive (CHC) use among obese women and contraceptive effectiveness: a systematic review
         Dragoman MV, Simmons KB, Paulen ME, Curtis KM.
         Contraception. 2016 Nov 4.
         
     46. Effects of maternal age and age-specific preterm birth rates on overall preterm birth rates - United States, 2007 and 2014
         Ferre C, Callaghan W, Olson C, Sharma A, Barfield W.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 04;65(43):1181-1184.
         
   • Substance Use and Abuse
     47. Vital Signs: Disparities in tobacco-related cancer incidence and mortality - United States, 2004-2013
         Henley SJ, Thomas CC, Sharapova SR, Momin B, Massetti GM, Winn DM, Armour BS, Richardson LC.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 11;65(44):1212-1218.
         
     48. Current cigarette smoking among adults - United States, 2005-2015
         Jamal A, King BA, Neff LJ, Whitmill J, Babb SD, Graffunder CM.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 11;65(44):1205-1211.
         
     49. Income inequality and U.S. Children's secondhand smoke exposure: Distinct associations by race-ethnicity
         Shenassa ED, Rossen LM, Cohen J, Morello-Frosch R, Payne-Sturges DC.
         Nicotine Tob Res. 2016 Nov 3.
         
   • Zoonotic and Vectorborne Diseases
     50. Notes from the Field: Rift Valley Fever Response - Kabale District, Uganda, March 2016
         de St Maurice A, Nyakarahuka L, Purpura L, Ervin E, Tumusiime A, Balinandi S, Kayondo J, Mulei S, Namutebi AM, Tusiime P, Wiersma S, Nichol S, Rollin P, Klena J, Knust B, Shoemaker T.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 04;65(43):1200-1201.
         
     51. Incidence of Zika virus disease by age and sex - Puerto Rico, November 1, 2015-October 20, 2016
         Lozier M, Adams L, Febo MF, Torres-Aponte J, Bello-Pagan M, Ryff KR, Munoz-Jordan J, Garcia M, Rivera A, Read JS, Waterman SH, Sharp TM, Rivera-Garcia B.
         MMWR Morb Mortal Wkly Rep. 2016 Nov 11;65(44):1219-1223.
         
     52. A cluster-randomized controlled trial to reduce diarrheal disease and dengue entomological risk factors in rural primary schools in Colombia
         Overgaard HJ, Alexander N, Matiz MI, Jaramillo JF, Olano VA, Vargas S, Sarmiento D, Lenhart A, Stenstrom TA.
         PLoS Negl Trop Dis. 2016 Nov;10(11):e0005106.
         
     53. Measuring Haitian children's exposure to chikungunya, dengue and malaria
         Poirier MJ, Moss DM, Feeser KR, Streit TG, Chang GJ, Whitney M, Russell BJ, Johnson BW, Basile AJ, Goodman CH, Barry AK, Lammie PJ.
         Bull World Health Organ. 2016 Nov 1;94(11):817-825a.
         
     54. Dengue and West Nile virus transmission in children and adults in coastal Kenya
         Vu DM, Banda T, Teng CY, Heimbaugh C, Muchiri EM, Mungai PL, Mutuku FM, Brichard J, Gildengorin G, Borland EM, Powers AM, Kitron U, King CH, LaBeaud AD.
         Am J Trop Med Hyg. 2016 Nov 7.
         
   
   

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CDC Science Clips Production Staff

• John Iskander, MD MPH, Editor
• Gail Bang, MLIS, Librarian
• Kathy Tucker, Librarian
• William (Bill) Thomas, MLIS, Librarian
• Onnalee Gomez, MS, Health Scientist
• Jarvis Sims, MIT, MLIS, Librarian

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DISCLAIMER: Articles listed in the CDC Science Clips are selected by the Stephen B. Thacker CDC Library to provide current awareness of the public health literature. An article's inclusion does not necessarily represent the views of the Centers for Disease Control and Prevention nor does it imply endorsement of the article's methods or findings. CDC and DHHS assume no responsibility for the factual accuracy of the items presented. The selection, omission, or content of items does not imply any endorsement or other position taken by CDC or DHHS. Opinion, findings and conclusions expressed by the original authors of items included in the Clips, or persons quoted therein, are strictly their own and are in no way meant to represent the opinion or views of CDC or DHHS. References to publications, news sources, and non-CDC Websites are provided solely for informational purposes and do not imply endorsement by CDC or DHHS.