CCL5 Allele and Genotype Frequencies
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Available polymorphism(s)
Common Designations | |||
---|---|---|---|
rs number |
Nucleotide change | Amino acid change |
Genotyping method |
rs2280788 |
-95C>G | TaqMan |
By Race/Ethnicity
Variant | Race-ethnicity | Allele % (95% CI) |
Chi-square P-value† |
Genotype % (95% CI) |
Chi-square P-value† |
HW P-value‡ |
|||
---|---|---|---|---|---|---|---|---|---|
rs2280788 | C | G | CC | CG | GG | ||||
Non-Hispanic White | 97.2 (96.8, 97.5) | 2.8 (2.5, 3.2) | <0.001 | 94.6 (93.9, 95.2) | 5.2 (4.6, 5.9) | 0.2 (0.1, 0.5) | <0.001 | 0.04 | |
Non-Hispanic Black | 99.3 (98.9, 99.6) | 0.7 (0.4, 1.1) | 98.7 (97.8, 99.2) | 1.3 (0.8, 2.2) | 0.0 (NA) | 0.79 | |||
Mexican American | 98.7 (98.3, 99.0) | 1.3 (1.0, 1.7) | 97.4 (96.6, 98.0) | 2.6 (2.0, 3.4) | 0.0 (NA) | 0.63 | |||
Total* | 97.4 (97.0, 97.7) | 2.6 (2.3, 3.0) | 94.9 (94.2, 95.5) | 5.0 (4.4, 5.6) | 0.1 (0.0, 0.4) |
* Includes all U.S. race/ethnic groups.
† “other” race/ethnicity category was not included in chi-square tests.
‡ P-values from unweighted chi-square goodness-of-fit tests to test for deviations from Hardy-Weinberg (HW) proportions.
By Age*
Variant | Age (years) | Allele % (95% CI) |
Chi-square P-value |
Genotype % (95% CI) |
Chi-square P-value |
|||
---|---|---|---|---|---|---|---|---|
rs2280788 | C | G | CC | CG | GG | |||
12-19 | 98.0 (95.5, 99.1) | 2.0 (0.9, 4.5) | 0.250 | 96.0 (91.2, 98.2) | 4.0 (1.8, 8.8) | 0.0 (NA) | 0.019 | |
20-39 | 96.8 (96.1, 97.4) | 3.2 (2.6, 3.9) | 93.7 (92.4, 94.8) | 6.2 (5.2, 7.4) | 0.1 (0.0, 0.6) | |||
40-59 | 97.6 (96.7, 98.2) | 2.4 (1.8, 3.3) | 95.3 (93.4, 96.6) | 4.6 (3.2, 6.6) | 0.1 (0.0, 0.8) | |||
>=60 | 97.9 (97.1, 98.5) | 2.1 (1.5, 2.9) | 96.0 (94.5, 97.0) | 3.8 (2.9, 5.1) | 0.2 (0.1, 0.7) | |||
Total | 97.4 (97.0, 97.7) | 2.6 (2.3, 3.0) | 94.9 (94.2, 95.5) | 5.0 (4.4, 5.6) | 0.1 (0.0, 0.4) |
* Includes all participants, regardless of race/ethnicity.
By Sex*
Variant | Sex | Allele % (95% CI) |
Chi-square P-value |
Genotype % (95% CI) |
Chi-square P-value |
|||
---|---|---|---|---|---|---|---|---|
rs2280788 | C | G | CC | CG | GG | |||
Male | 97.8 (97.1, 98.3) | 2.2 (1.7, 2.9) | 0.172 | 95.6 (94.4, 96.6) | 4.4 (3.4, 5.6) | 0.1 (0.0, 0.5) | 0.452 | |
Female | 97.0 (96.1, 97.7) | 3.0 (2.3, 3.9) | 94.2 (92.6, 95.5) | 5.6 (4.4, 7.1) | 0.2 (0.1, 0.6) | |||
Total | 97.4 (97.0, 97.7) | 2.6 (2.3, 3.0) | 94.9 (94.2, 95.5) | 5.0 (4.4, 5.6) | 0.1 (0.0, 0.4) |
* Includes all participants, regardless of race/ethnicity.
By Race/Ethnicity and Age
Variant | Race-ethnicity | Age (years) | Allele % (95% CI) |
Genotype % (95% CI) |
|||
---|---|---|---|---|---|---|---|
rs2280788 | C | G | CC | CG | GG | ||
Non-Hispanic White | 12-19 | 97.9 (95.2, 99.1) | 2.1 (0.9, 4.8) | 95.9 (90.4, 98.3) | 4.1 (1.7, 9.6) | 0.0 (NA) | |
20-39 | 96.4 (95.5, 97.2) | 3.6 (2.8, 4.5) | 93.1 (91.4, 94.4) | 6.7 (5.4, 8.3) | 0.2 (0.0, 0.8) | ||
40-59 | 97.5 (96.5, 98.2) | 2.5 (1.8, 3.5) | 95.1 (93.0, 96.6) | 4.7 (3.2, 7.0) | 0.2 (0.0, 1.0) | ||
>=60 | 97.7 (96.8, 98.4) | 2.3 (1.6, 3.2) | 95.7 (94.1, 96.9) | 4.0 (3.0, 5.4) | 0.2 (0.1, 0.9) | ||
Non-Hispanic Black | 12-19 | 99.5 (98.6, 99.8) | 0.5 (0.2, 1.4) | 98.9 (97.2, 99.6) | 1.1 (0.4, 2.8) | 0.0 (NA) | |
20-39 | 99.2 (98.4, 99.6) | 0.8 (0.4, 1.6) | 98.5 (96.8, 99.3) | 1.5 (0.7, 3.2) | 0.0 (NA) | ||
40-59 | 99.2 (98.1, 99.7) | 0.8 (0.3, 1.9) | 98.5 (96.1, 99.4) | 1.5 (0.6, 3.9) | 0.0 (NA) | ||
>=60 | 99.7 (98.7, 99.9) | 0.3 (0.1, 1.3) | 99.4 (97.4, 99.9) | 0.6 (0.1, 2.6) | 0.0 (NA) | ||
Mexican American | 12-19 | 98.2 (96.2, 99.1) | 1.8 (0.9, 3.8) | 96.3 (92.5, 98.2) | 3.7 (1.8, 7.5) | 0.0 (NA) | |
20-39 | 98.9 (98.2, 99.4) | 1.1 (0.6, 1.8) | 97.8 (96.4, 98.7) | 2.2 (1.3, 3.6) | 0.0 (NA) | ||
40-59 | 98.7 (98.0, 99.1) | 1.3 (0.9, 2.0) | 97.3 (95.9, 98.2) | 2.7 (1.8, 4.1) | 0.0 (NA) | ||
>=60 | 98.9 (97.5, 99.5) | 1.1 (0.5, 2.5) | 97.7 (95.1, 99.0) | 2.3 (1.0, 4.9) | 0.0 (NA) |
By Race/Ethnicity and Sex
Variant | Race-ethnicity | Sex | Allele % (95% CI) |
Genotype % (95% CI) |
|||
---|---|---|---|---|---|---|---|
rs2280788 | C | G | CC | CG | GG | ||
Non-Hispanic White | Male | 97.4 (96.5, 98.0) | 2.6 (2.0, 3.5) | 94.9 (93.2, 96.2) | 5.0 (3.8, 6.7) | 0.1 (0.0, 0.7) | |
Female | 97.0 (96.3, 97.6) | 3.0 (2.4, 3.7) | 94.3 (93.0, 95.4) | 5.4 (4.4, 6.7) | 0.3 (0.1, 0.9) | ||
Non-Hispanic Black | Male | 99.3 (98.6, 99.7) | 0.7 (0.3, 1.4) | 98.6 (97.1, 99.4) | 1.4 (0.6, 2.9) | 0.0 (NA) | |
Female | 99.4 (98.8, 99.7) | 0.6 (0.3, 1.2) | 98.7 (97.6, 99.4) | 1.3 (0.6, 2.4) | 0.0 (NA) | ||
Mexican American | Male | 98.9 (97.8, 99.4) | 1.1 (0.6, 2.2) | 97.7 (95.6, 98.8) | 2.3 (1.2, 4.4) | 0.0 (NA) | |
Female | 98.5 (97.6, 99.1) | 1.5 (0.9, 2.4) | 97.1 (95.1, 98.3) | 2.9 (1.7, 4.9) | 0.0 (NA) |
- Page last reviewed: March 16, 2009 (archived document)
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